caa a22 4500 445323973 CHVBK 20180317142713.0 cr unu---uuuuu 170323e20110301xx s 000 0 eng 10.1007/s10681-010-0331-8 doi (NATIONALLICENCE)springer-10.1007/s10681-010-0331-8 Development of tomato SSR markers from anchored BAC clones of chromosome 12 and their application for genetic diversity analysis and linkage mapping [Elektronische Daten] [Subramaniam Geethanjali, Palchamy Kadirvel, Robert de la Peña, Eguru Rao, Jaw-Fen Wang] In this study, we developed a total of 37 simple sequence repeat (SSR) markers from 11 bacterial artificial chromosome (BAC) clone sequences anchored on chromosome 12 of tomato available at Solanaceae Genomics Network. These SSR markers could group a set of 16 tomato genotypes comprising of Solanum lycopersicum, S. pimpinellifolium, S. habrochaites, and S. pennellii unambiguously according to their known species status. Clear subgroups of genotypes within S. lycopersicum were also observed. A subset of 16 SSR markers representing the 11 BAC clones was used for developing genetic linkage maps of three interspecific F2 populations produced from the crosses involving a common S. lycopersicum parent (CLN2498E) with S. pennellii (LA1940), S. habrochaites (LA407) and S. pimpinellifolium (LA1579). The length of the genetic linkage maps were 112.5cM, 109.3cM and 114.1cM, respectively. Finally, an integrated genetic linkage map spanning a total length of 118.7cM was developed. The reported SSR markers are uniformly distributed on chromosome 12 and would be useful for genetic diversity and mapping studies in tomato. Springer Science+Business Media B.V., 2010 Bacterial artificial chromosome nationallicence Simple sequence repeats nationallicence Genetic diversity nationallicence Linkage map nationallicence Solanum lycopersicum nationallicence Geethanjali Subramaniam AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut Kadirvel Palchamy AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut de la Peña Robert AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut Rao Eguru AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut Wang Jaw-Fen AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut Euphytica Springer Netherlands 178/2(2011-03-01), 283-295 0014-2336 178:2<283 2011 178 10681 https://doi.org/10.1007/s10681-010-0331-8 text/html Onlinezugriff via DOI 1 research-article jats NATIONALLICENCE 856 40 https://doi.org/10.1007/s10681-010-0331-8 text/html Onlinezugriff via DOI NATIONALLICENCE 700 1- Geethanjali Subramaniam AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut NATIONALLICENCE 700 1- Kadirvel Palchamy AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut NATIONALLICENCE 700 1- de la Peña Robert AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut NATIONALLICENCE 700 1- Rao Eguru AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut NATIONALLICENCE 700 1- Wang Jaw-Fen AVRDC - The World Vegetable Center, 60 Yi-Min Liao, Shanhua, 74151, Tainan, Taiwan aut NATIONALLICENCE 773 0- Euphytica Springer Netherlands 178/2(2011-03-01), 283-295 0014-2336 178:2<283 2011 178 10681 Metadata rights reserved Springer special CC-BY-NC licence nationallicence BK010053 XK010053 XK010000 NATIONALLICENCE NATIONALLICENCE NL-springer