caa a22 4500 467900566 CHVBK 20180406152816.0 cr unu---uuuuu 170328e20061201xx s 000 0 eng 10.1007/s00299-006-0196-4 doi (NATIONALLICENCE)springer-10.1007/s00299-006-0196-4 The complete chloroplast genome sequences of Solanum tuberosum and comparative analysis with Solanaceae species identified the presence of a 241-bp deletion in cultivated potato chloroplast DNA sequence [Elektronische Daten] [Hwa-Jee Chung, Jong Jung, Hyun-Woo Park, Joo-Hwan Kim, Hyun Cha, Sung Min, Won-Joong Jeong, Jang Liu] The complete nucleotide sequence of the chloroplast genome of potato Solanum tuberosum L. cv. Desiree was determined. The circular double-stranded DNA, which consists of 155,312bp, contains a pair of inverted repeat regions (IRa, IRb) of 25,595bp each. The inverted repeat regions are separated by small and large single copy regions of 18,373 and 85,749bp, respectively. The genome contains 79 proteins, 30 tRNAs, 4 rRNAs, and unidentified genes. A comparison of chloroplast genomes of seven Solanaceae species revealed that the gene content and their relative positions of S. tuberosum are similar to the other six Solanaceae species. However, undefined open reading frames (ORFs) in LSC region were highly diverged in Solanaceae species except N. sylvestris. Detailed comparison was identified by numerous indels in the intergenic regions that were mostly located in the LSC region. Among them, a single large 241-bp deletion, was not associated with direct repeats and found in only S. tuberosum, clearly discriminates a cultivated potato from wild potato species Solanum bulbocastanum. The extent of sequence divergence may provide the basis for evaluating genetic diversity within the Solanaceae species, and will be useful to examine the evolutionary processes in potato landraces. Springer-Verlag, 2006 Cultivated potato ( Solanum tuberosum L. cv. Desiree) nationallicence Chloroplast genome sequence nationallicence Indels nationallicence Intergenic region nationallicence Open reading frame (ORF) nationallicence Chung Hwa-Jee Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut Jung Jong Laboratory of Functional Genomics for Plant Secondary Metabolism, Eugentech Inc., 305-333, Daejeon, Korea aut Park Hyun-Woo Laboratory of Functional Genomics for Plant Secondary Metabolism, Eugentech Inc., 305-333, Daejeon, Korea aut Kim Joo-Hwan Department of Life Science, Daejeon University, 300-716, Daejeon, Korea aut Cha Hyun Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut Min Sung Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut Jeong Won-Joong Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut Liu Jang Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut Plant Cell Reports Springer-Verlag 25/12(2006-12-01), 1369-1379 0721-7714 25:12<1369 2006 25 299 https://doi.org/10.1007/s00299-006-0196-4 text/html Onlinezugriff via DOI 1 research-article jats NATIONALLICENCE 856 40 https://doi.org/10.1007/s00299-006-0196-4 text/html Onlinezugriff via DOI NATIONALLICENCE 700 1- Chung Hwa-Jee Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut NATIONALLICENCE 700 1- Jung Jong Laboratory of Functional Genomics for Plant Secondary Metabolism, Eugentech Inc., 305-333, Daejeon, Korea aut NATIONALLICENCE 700 1- Park Hyun-Woo Laboratory of Functional Genomics for Plant Secondary Metabolism, Eugentech Inc., 305-333, Daejeon, Korea aut NATIONALLICENCE 700 1- Kim Joo-Hwan Department of Life Science, Daejeon University, 300-716, Daejeon, Korea aut NATIONALLICENCE 700 1- Cha Hyun Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut NATIONALLICENCE 700 1- Min Sung Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut NATIONALLICENCE 700 1- Jeong Won-Joong Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut NATIONALLICENCE 700 1- Liu Jang Plant Genomics Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon, 305-333, Korea aut NATIONALLICENCE 773 0- Plant Cell Reports Springer-Verlag 25/12(2006-12-01), 1369-1379 0721-7714 25:12<1369 2006 25 299 Metadata rights reserved Springer special CC-BY-NC licence nationallicence BK010053 XK010053 XK010000 NATIONALLICENCE NATIONALLICENCE NL-springer