naa a22 4500 510754333 CHVBK 20180411083117.0 cr unu---uuuuu 180411e20130401xx s 000 0 eng 10.1007/s13131-013-0298-0 doi (NATIONALLICENCE)springer-10.1007/s13131-013-0298-0 The complete mitochondrial genome of the grey bamboo shark ( Chiloscyllium griseum ) (Orectolobiformes: Hemiscylliidae): genomic characterization and phylogenetic application [Elektronische Daten] [Xiao Chen, Weiming Ai, Le Ye, Xuehui Wang, Chongwen Lin, Shengyun Yang] The complete mitochondrial genome of the grey bamboo shark, Chiloscyllium griseum (Orectolobiformes: Hemiscylliidae) was obtained, with a total of 16 755 base pairs (bp). The mitogenome encoded 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs and a noncoding control region, a gene arrangement identical to the most common type found in vertebrates. All tRNA sequences were folded into typical cloverleaf secondary structure with the exception of tRNA-Ser2, in which the DHU arm stem was replaced with 12 unpaired nucleotides and formed a simple loop. In the control region, the putative termination-associated sequences (TAS) with hairpin-loop structure and the conserved sequence blocks (CSB) I-III were identified and considered to be associated with the replication and transcription of mtDNA. No repeat motifs were found in the mitogenome of C. griseum. On the basis of the mitogenomic data available in the Class Chondrichthyes from both Genbank and this study, and the phylogenetic analyses using maximum likelihood (ML) and Bayesian inference (BI) methods, the results strongly support the basal division between batoids and sharks and the monophyly of the Superorder Galeomorphii, and confirm the phylogenetic position of C. griseum in the Subclass Elasmobranchii. This study suggests that the mitogenomic data are more robust for reconstructing phylogenetic relationships than individual genes in the Elasmobranchii. The Chinese Society of Oceanography and Springer-Verlag Berlin Heidelberg, 2013 mitochondrial genome nationallicence Chiloscyllium griseum nationallicence Chondrichthyes nationallicence phylogeny nationallicence carpet shark nationallicence Galeomorphii nationallicence Chen Xiao College of Fisheries, Ocean University of China, 266003, Qingdao, China aut Ai Weiming Department of Marine Science, School of Life Science, Wenzhou Medical College, 325035, Wenzhou, China aut Ye Le South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 510300, Guangzhou, China aut Wang Xuehui South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 510300, Guangzhou, China aut Lin Chongwen Zhejiang Key Laboratory of Exploitation and Preservation of Coastal Bio-Resource, Zhejiang Mariculture Research Institute, 325005, Wenzhou, China aut Yang Shengyun Laboratory of Marine Biodiversity and Global Change, College of Ocean and Earth Sciences, Xiamen University, 361005, Xiamen, China aut Acta Oceanologica Sinica The Chinese Society of Oceanography 32/4(2013-04-01), 59-65 0253-505X 32:4<59 2013 32 13131 https://doi.org/10.1007/s13131-013-0298-0 text/html Onlinezugriff via DOI 1 research-article jats NATIONALLICENCE 856 40 https://doi.org/10.1007/s13131-013-0298-0 text/html Onlinezugriff via DOI NATIONALLICENCE 700 1- Chen Xiao College of Fisheries, Ocean University of China, 266003, Qingdao, China aut NATIONALLICENCE 700 1- Ai Weiming Department of Marine Science, School of Life Science, Wenzhou Medical College, 325035, Wenzhou, China aut NATIONALLICENCE 700 1- Ye Le South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 510300, Guangzhou, China aut NATIONALLICENCE 700 1- Wang Xuehui South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, 510300, Guangzhou, China aut NATIONALLICENCE 700 1- Lin Chongwen Zhejiang Key Laboratory of Exploitation and Preservation of Coastal Bio-Resource, Zhejiang Mariculture Research Institute, 325005, Wenzhou, China aut NATIONALLICENCE 700 1- Yang Shengyun Laboratory of Marine Biodiversity and Global Change, College of Ocean and Earth Sciences, Xiamen University, 361005, Xiamen, China aut NATIONALLICENCE 773 0- Acta Oceanologica Sinica The Chinese Society of Oceanography 32/4(2013-04-01), 59-65 0253-505X 32:4<59 2013 32 13131 Metadata rights reserved Springer special CC-BY-NC licence nationallicence BK010053 XK010053 XK010000 NATIONALLICENCE NATIONALLICENCE NL-springer