naa a22 4500 51075922X CHVBK 20180411083133.0 cr unu---uuuuu 180411e20130701xx s 000 0 eng 10.1007/s13225-013-0247-4 doi (NATIONALLICENCE)springer-10.1007/s13225-013-0247-4 The ApMat marker can resolve Colletotrichum species: a case study with Mangifera indica [Elektronische Daten] [Gunjan Sharma, Navinder Kumar, Bevan Weir, Kevin Hyde, Belle Shenoy] Anthracnose disease caused by the Colletotrichum gloeosporioides species complex is a major problem worldwide. In this study, we investigated the phylogenetic diversity of 207 Indian Colletotrichum isolates, associated with symptomatic and asymptomatic tissues of mango, belonging to this species complex. Phylogenetic analyses were performed based on a 6-gene dataset (act, cal, chs1, gapdh, ITS and tub2), followed by ApMat sequence-analysis. The ApMat-based phylogeny was found to be superior as it provided finer resolution in most of the species-level clades. Importantly, the ApMat marker identified seven lineages within C. siamense sensu lato, including C. jasmini-sambac, C. hymenocallidis, C. melanocaulon, C. siamense sensu stricto and three undesignated, potentially novel lineages. In this study, C. fragariae sensu stricto, C. fructicola, C. jasmini-sambac, C. melanocaulon and five undesignated, potentially novel lineages were found to be associated with mango tissues. There is a need to develop a consensus among mycologists as to which genes should be used to define and delimit a Colletotrichum species and in the mean time mycologists should voluntarily restrain from describing new species based on inadequate datasets. Mushroom Research Foundation, 2013 Anthracnose nationallicence Identification nationallicence Phylogeny nationallicence Polyphasic taxonomy nationallicence Secondary barcode nationallicence Systematics nationallicence Sharma Gunjan Microbial Type Culture Collection and Gene Bank, CSIR-Institute of Microbial Technology, Sector 39-A, 160036, Chandigarh, India aut Kumar Navinder Microbial Type Culture Collection and Gene Bank, CSIR-Institute of Microbial Technology, Sector 39-A, 160036, Chandigarh, India aut Weir Bevan Landcare Research, Private Bag 92170, Auckland, New Zealand aut Hyde Kevin Institute of Excellence in Fungal Research and School of Science, Mae Fah Luang University, 57100, Chiang Rai, Thailand aut Shenoy Belle CSIR-National Institute of Oceanography, 403004, Dona Paula, Goa, India aut Fungal Diversity Springer Netherlands 61/1(2013-07-01), 117-138 1560-2745 61:1<117 2013 61 13225 https://doi.org/10.1007/s13225-013-0247-4 text/html Onlinezugriff via DOI 1 research-article jats NATIONALLICENCE 856 40 https://doi.org/10.1007/s13225-013-0247-4 text/html Onlinezugriff via DOI NATIONALLICENCE 700 1- Sharma Gunjan Microbial Type Culture Collection and Gene Bank, CSIR-Institute of Microbial Technology, Sector 39-A, 160036, Chandigarh, India aut NATIONALLICENCE 700 1- Kumar Navinder Microbial Type Culture Collection and Gene Bank, CSIR-Institute of Microbial Technology, Sector 39-A, 160036, Chandigarh, India aut NATIONALLICENCE 700 1- Weir Bevan Landcare Research, Private Bag 92170, Auckland, New Zealand aut NATIONALLICENCE 700 1- Hyde Kevin Institute of Excellence in Fungal Research and School of Science, Mae Fah Luang University, 57100, Chiang Rai, Thailand aut NATIONALLICENCE 700 1- Shenoy Belle CSIR-National Institute of Oceanography, 403004, Dona Paula, Goa, India aut NATIONALLICENCE 773 0- Fungal Diversity Springer Netherlands 61/1(2013-07-01), 117-138 1560-2745 61:1<117 2013 61 13225 Metadata rights reserved Springer special CC-BY-NC licence nationallicence BK010053 XK010053 XK010000 NATIONALLICENCE NATIONALLICENCE NL-springer