Probabilistic clustering of time-evolving distance data

Verfasser / Beitragende:
[Julia Vogt, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth, Gunnar Rätsch]
Ort, Verlag, Jahr:
2015
Enthalten in:
Machine Learning, 100/2-3(2015-09-01), 635-654
Format:
Artikel (online)
ID: 605478309
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024 7 0 |a 10.1007/s10994-015-5516-x  |2 doi 
035 |a (NATIONALLICENCE)springer-10.1007/s10994-015-5516-x 
245 0 0 |a Probabilistic clustering of time-evolving distance data  |h [Elektronische Daten]  |c [Julia Vogt, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth, Gunnar Rätsch] 
520 3 |a We present a novel probabilistic clustering model for objects that are represented via pairwise distances and observed at different time points. The proposed method utilizes the information given by adjacent time points to find the underlying cluster structure and obtain a smooth cluster evolution. This approach allows the number of objects and clusters to differ at every time point, and no identification on the identities of the objects is needed. Further, the model does not require the number of clusters being specified in advance—they are instead determined automatically using a Dirichlet process prior. We validate our model on synthetic data showing that the proposed method is more accurate than state-of-the-art clustering methods. Finally, we use our dynamic clustering model to analyze and illustrate the evolution of brain cancer patients over time. 
540 |a The Author(s), 2015 
700 1 |a Vogt  |D Julia  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
700 1 |a Kloft  |D Marius  |u Department of Computer Science, Humboldt University of Berlin, Berlin, Germany  |4 aut 
700 1 |a Stark  |D Stefan  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
700 1 |a Raman  |D Sudhir  |u Translational Neuromodeling Unit (TNU), Institute for Biomedical Engineering, University of Zurich and ETH Zurich, Zurich, Switzerland  |4 aut 
700 1 |a Prabhakaran  |D Sandhya  |u Department of Mathematics and Computer Science, University of Basel, Basel, Switzerland  |4 aut 
700 1 |a Roth  |D Volker  |u Department of Mathematics and Computer Science, University of Basel, Basel, Switzerland  |4 aut 
700 1 |a Rätsch  |D Gunnar  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
773 0 |t Machine Learning  |d Springer US; http://www.springer-ny.com  |g 100/2-3(2015-09-01), 635-654  |x 0885-6125  |q 100:2-3<635  |1 2015  |2 100  |o 10994 
856 4 0 |u https://doi.org/10.1007/s10994-015-5516-x  |q text/html  |z Onlinezugriff via DOI 
898 |a BK010053  |b XK010053  |c XK010000 
900 7 |a Metadata rights reserved  |b Springer special CC-BY-NC licence  |2 nationallicence 
908 |D 1  |a research-article  |2 jats 
949 |B NATIONALLICENCE  |F NATIONALLICENCE  |b NL-springer 
950 |B NATIONALLICENCE  |P 856  |E 40  |u https://doi.org/10.1007/s10994-015-5516-x  |q text/html  |z Onlinezugriff via DOI 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Vogt  |D Julia  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Kloft  |D Marius  |u Department of Computer Science, Humboldt University of Berlin, Berlin, Germany  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Stark  |D Stefan  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Raman  |D Sudhir  |u Translational Neuromodeling Unit (TNU), Institute for Biomedical Engineering, University of Zurich and ETH Zurich, Zurich, Switzerland  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Prabhakaran  |D Sandhya  |u Department of Mathematics and Computer Science, University of Basel, Basel, Switzerland  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Roth  |D Volker  |u Department of Mathematics and Computer Science, University of Basel, Basel, Switzerland  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Rätsch  |D Gunnar  |u Computational Biology, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, 10065, New York, NY, USA  |4 aut 
950 |B NATIONALLICENCE  |P 773  |E 0-  |t Machine Learning  |d Springer US; http://www.springer-ny.com  |g 100/2-3(2015-09-01), 635-654  |x 0885-6125  |q 100:2-3<635  |1 2015  |2 100  |o 10994