Modeling DNA electronic circular dichroism by QM/MM methods and Frenkel Hamiltonian

Verfasser / Beitragende:
[Hugo Gattuso, Xavier Assfeld, Antonio Monari]
Ort, Verlag, Jahr:
2015
Enthalten in:
Theoretical Chemistry Accounts, 134/3(2015-03-01), 1-8
Format:
Artikel (online)
ID: 60548774X
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024 7 0 |a 10.1007/s00214-015-1640-8  |2 doi 
035 |a (NATIONALLICENCE)springer-10.1007/s00214-015-1640-8 
245 0 0 |a Modeling DNA electronic circular dichroism by QM/MM methods and Frenkel Hamiltonian  |h [Elektronische Daten]  |c [Hugo Gattuso, Xavier Assfeld, Antonio Monari] 
520 3 |a We report the modeling of the electronic circular dichroism spectra of different double helix B-DNA sequences. The circular dichroism spectra have been obtained in the framework of the Frenkel excitation theory, while DNA conformational space has been explored using molecular dynamics. Excited states are obtained using hybrid quantum mechanics/molecular mechanics theory at time-dependent density functional theory level. The validity of the effective Frenkel Hamiltonian approach is assessed by comparison with full quantum mechanics treatment of many interacting chromophores. The convergence of the simulated spectra with the number of interacting chromophores is assessed as well as their behavior with respect to experimental results. 
540 |a Springer-Verlag Berlin Heidelberg, 2015 
690 7 |a Electronic circular dichroism  |2 nationallicence 
690 7 |a DNA structure and dynamic  |2 nationallicence 
690 7 |a Supramolecular dichroism  |2 nationallicence 
690 7 |a QM/MM methods  |2 nationallicence 
690 7 |a Frenkel exciton  |2 nationallicence 
700 1 |a Gattuso  |D Hugo  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
700 1 |a Assfeld  |D Xavier  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
700 1 |a Monari  |D Antonio  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
773 0 |t Theoretical Chemistry Accounts  |d Springer Berlin Heidelberg  |g 134/3(2015-03-01), 1-8  |x 1432-881X  |q 134:3<1  |1 2015  |2 134  |o 214 
856 4 0 |u https://doi.org/10.1007/s00214-015-1640-8  |q text/html  |z Onlinezugriff via DOI 
898 |a BK010053  |b XK010053  |c XK010000 
900 7 |a Metadata rights reserved  |b Springer special CC-BY-NC licence  |2 nationallicence 
908 |D 1  |a research-article  |2 jats 
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950 |B NATIONALLICENCE  |P 700  |E 1-  |a Gattuso  |D Hugo  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Assfeld  |D Xavier  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Monari  |D Antonio  |u Theory-Modeling-Simulation SRSMC, Université de Lorraine - Nancy, Vandoeuvre-lès-Nancy, France  |4 aut 
950 |B NATIONALLICENCE  |P 773  |E 0-  |t Theoretical Chemistry Accounts  |d Springer Berlin Heidelberg  |g 134/3(2015-03-01), 1-8  |x 1432-881X  |q 134:3<1  |1 2015  |2 134  |o 214