Methylotrophs in natural habitats: current insights through metagenomics

Verfasser / Beitragende:
[Ludmila Chistoserdova]
Ort, Verlag, Jahr:
2015
Enthalten in:
Applied Microbiology and Biotechnology, 99/14(2015-07-01), 5763-5779
Format:
Artikel (online)
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024 7 0 |a 10.1007/s00253-015-6713-z  |2 doi 
035 |a (NATIONALLICENCE)springer-10.1007/s00253-015-6713-z 
100 1 |a Chistoserdova  |D Ludmila  |u Department of Chemical Engineering, University of Washington, Seattle, WA, USA  |4 aut 
245 1 0 |a Methylotrophs in natural habitats: current insights through metagenomics  |h [Elektronische Daten]  |c [Ludmila Chistoserdova] 
520 3 |a The focus of this review is on the recent data from the omics approaches, measuring the presence of methylotrophs in natural environments. Both Bacteria and Archaea are considered. The data are discussed in the context of the current knowledge on the biochemistry of methylotrophy and the physiology of cultivated methylotrophs. One major issue discussed is the recent metagenomic data pointing toward the activity of "aerobic” methanotrophs, such as Methylobacter, in microoxic or hypoxic conditions. A related issue of the metabolic distinction between aerobic and "anaerobic” methylotrophy is addressed in the light of the genomic and metagenomic data for respective organisms. The role of communities, as opposed to single-organism activities in environmental cycling of single-carbon compounds, such as methane, is also discussed. In addition, the emerging issue of the role of non-traditional methylotrophs in global metabolism of single-carbon compounds and the role of methylotrophy pathways in non-methylotrophs is briefly mentioned. 
540 |a Springer-Verlag Berlin Heidelberg, 2015 
690 7 |a Methylotrophy  |2 nationallicence 
690 7 |a Methane oxidation  |2 nationallicence 
690 7 |a Metagenomics  |2 nationallicence 
690 7 |a Methylobacter  |2 nationallicence 
690 7 |a Methylophilaceae  |2 nationallicence 
690 7 |a Environmental detection  |2 nationallicence 
773 0 |t Applied Microbiology and Biotechnology  |d Springer Berlin Heidelberg  |g 99/14(2015-07-01), 5763-5779  |x 0175-7598  |q 99:14<5763  |1 2015  |2 99  |o 253 
856 4 0 |u https://doi.org/10.1007/s00253-015-6713-z  |q text/html  |z Onlinezugriff via DOI 
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900 7 |a Metadata rights reserved  |b Springer special CC-BY-NC licence  |2 nationallicence 
908 |D 1  |a review-article  |2 jats 
949 |B NATIONALLICENCE  |F NATIONALLICENCE  |b NL-springer 
950 |B NATIONALLICENCE  |P 856  |E 40  |u https://doi.org/10.1007/s00253-015-6713-z  |q text/html  |z Onlinezugriff via DOI 
950 |B NATIONALLICENCE  |P 100  |E 1-  |a Chistoserdova  |D Ludmila  |u Department of Chemical Engineering, University of Washington, Seattle, WA, USA  |4 aut 
950 |B NATIONALLICENCE  |P 773  |E 0-  |t Applied Microbiology and Biotechnology  |d Springer Berlin Heidelberg  |g 99/14(2015-07-01), 5763-5779  |x 0175-7598  |q 99:14<5763  |1 2015  |2 99  |o 253