Properties and biotechnological applications of natural and engineered haloalkane dehalogenases

Verfasser / Beitragende:
[Yuji Nagata, Yoshiyuki Ohtsubo, Masataka Tsuda]
Ort, Verlag, Jahr:
2015
Enthalten in:
Applied Microbiology and Biotechnology, 99/23(2015-12-01), 9865-9881
Format:
Artikel (online)
ID: 605504709
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024 7 0 |a 10.1007/s00253-015-6954-x  |2 doi 
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245 0 0 |a Properties and biotechnological applications of natural and engineered haloalkane dehalogenases  |h [Elektronische Daten]  |c [Yuji Nagata, Yoshiyuki Ohtsubo, Masataka Tsuda] 
520 3 |a Haloalkane dehalogenases (HLDs) convert halogenated compounds to corresponding alcohols, halides, and protons. They belong to α/β-hydrolases, and their principal catalytic mechanism is SN2 nucleophilic substitution followed by the addition of water. Since HLDs generally have broad and different substrate specificities, they have various biotechnological applications. HLDs have previously been believed to be present only in bacterial strains that utilize xenobiotic halogenated compounds, and three archetypal HLDs, i.e., DhlA, DhaA, and LinB, have been intensively investigated by biochemical, structural, and computational analyses. Furthermore, by using the resulting data and target-selected random mutagenesis approaches, these HLDs have been successfully engineered to improve their substrate specificities and activities. In addition, important insights into protein evolution have been obtained by studying these HLDs. At the same time, the genome and metagenome information has revealed that HLD homologues are widely distributed in many bacterial strains, including ones that have not been reported to degrade halogenated compounds. Some of these cryptic HLD homologues have been experimentally confirmed to be "true” HLDs with unique substrate specificities and enantioselectivities. Although their biological functions and physiological roles remain mysterious, these potential HLDs are considered promising materials for the development of new biocatalysts. 
540 |a Springer-Verlag Berlin Heidelberg, 2015 
690 7 |a Haloalkane dehalogenase  |2 nationallicence 
690 7 |a Environmental pollutant  |2 nationallicence 
690 7 |a Halogenated compound  |2 nationallicence 
690 7 |a Hydrolase  |2 nationallicence 
690 7 |a Protein engineering  |2 nationallicence 
690 7 |a Bacterial genome  |2 nationallicence 
690 7 |a Protein evolution  |2 nationallicence 
700 1 |a Nagata  |D Yuji  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
700 1 |a Ohtsubo  |D Yoshiyuki  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
700 1 |a Tsuda  |D Masataka  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
773 0 |t Applied Microbiology and Biotechnology  |d Springer Berlin Heidelberg  |g 99/23(2015-12-01), 9865-9881  |x 0175-7598  |q 99:23<9865  |1 2015  |2 99  |o 253 
856 4 0 |u https://doi.org/10.1007/s00253-015-6954-x  |q text/html  |z Onlinezugriff via DOI 
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900 7 |a Metadata rights reserved  |b Springer special CC-BY-NC licence  |2 nationallicence 
908 |D 1  |a review-article  |2 jats 
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950 |B NATIONALLICENCE  |P 700  |E 1-  |a Nagata  |D Yuji  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Ohtsubo  |D Yoshiyuki  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
950 |B NATIONALLICENCE  |P 700  |E 1-  |a Tsuda  |D Masataka  |u Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, 980-8577, Sendai, Japan  |4 aut 
950 |B NATIONALLICENCE  |P 773  |E 0-  |t Applied Microbiology and Biotechnology  |d Springer Berlin Heidelberg  |g 99/23(2015-12-01), 9865-9881  |x 0175-7598  |q 99:23<9865  |1 2015  |2 99  |o 253