Modelling of crystal structure of cis-1,2,3,6 and 3,4,5,6-tetrahydrophthalic anhydrides using lattice energy calculations
Gespeichert in:
Verfasser / Beitragende:
[A. Fredj, G. Day]
Ort, Verlag, Jahr:
2015
Enthalten in:
Journal of Molecular Modeling, 21/8(2015-08-01), 1-14
Format:
Artikel (online)
Online Zugang:
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| 024 | 7 | 0 | |a 10.1007/s00894-015-2756-4 |2 doi |
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| 245 | 0 | 0 | |a Modelling of crystal structure of cis-1,2,3,6 and 3,4,5,6-tetrahydrophthalic anhydrides using lattice energy calculations |h [Elektronische Daten] |c [A. Fredj, G. Day] |
| 520 | 3 | |a Lattice energy calculations using a model potential were performed to model the crystal structures of cis-1,2,3,6- and 3,4,5,6-tetrahydrophthalic (THP) anhydrides. The optimized molecular models using the DFT method at the B3LYP/6-31G** level were found consistent with the available experimental evidence and allowed all differences observed in crystal packing between cis-1,2,3,6- and 3,4,5,6-THP anhydrides to be reproduced. Calculations provide evidence for the presence of dipole-dipole C=O⋯C=O intermolecular interactions and support the idea that the molecules distort from their ideal geometries, improving packing in both crystals. The search for minima in the lattice energy of both crystals amongst the more common space groups with Z' = 1, using a simulated annealing crystal structure prediction procedure followed by lattice energy minimization showed that the observed structure of 3,4,5,6-THP anhydride (Z' = 2) is the thermodynamically most stable, and allowed us to justify why 3,4,5,6-THP anhydride crystallizes in such a complex structure with 16 molecules in the unit cell. The computational model was successful in predicting the second observed form at 173 K for cis-1,2,3,6-THP anhydride as a polymorph, and could predict several hypothetical structures with Z' = 1 that appear competitive with the observed structures. The results of phonon estimates of zero point intermolecular vibrational energy and entropy suggest that crystal structures of cis-1,2,3,6-THP anhydride cannot be predicted solely on the basis of lattice energy; factors other than thermodynamics favor the observed structures. | |
| 540 | |a Springer-Verlag Berlin Heidelberg, 2015 | ||
| 690 | 7 | |a Anhydride |2 nationallicence | |
| 690 | 7 | |a Crystal structure prediction |2 nationallicence | |
| 690 | 7 | |a Lattice energy calculation |2 nationallicence | |
| 690 | 7 | |a Intermolecular interaction |2 nationallicence | |
| 700 | 1 | |a Fredj |D A. |u Laboratoire de Spectroscopie Atomique, Moléculaire et Applications, Faculté des Sciences de Tunis, Campus Universitaire 1060, Tunis, Tunisie |4 aut | |
| 700 | 1 | |a Day |D G. |u Department of Chemistry, University of Southampton, SO17 1BJ, Southampton, UK |4 aut | |
| 773 | 0 | |t Journal of Molecular Modeling |d Springer Berlin Heidelberg |g 21/8(2015-08-01), 1-14 |x 1610-2940 |q 21:8<1 |1 2015 |2 21 |o 894 | |
| 856 | 4 | 0 | |u https://doi.org/10.1007/s00894-015-2756-4 |q text/html |z Onlinezugriff via DOI |
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| 900 | 7 | |a Metadata rights reserved |b Springer special CC-BY-NC licence |2 nationallicence | |
| 908 | |D 1 |a research-article |2 jats | ||
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| 950 | |B NATIONALLICENCE |P 856 |E 40 |u https://doi.org/10.1007/s00894-015-2756-4 |q text/html |z Onlinezugriff via DOI | ||
| 950 | |B NATIONALLICENCE |P 700 |E 1- |a Fredj |D A. |u Laboratoire de Spectroscopie Atomique, Moléculaire et Applications, Faculté des Sciences de Tunis, Campus Universitaire 1060, Tunis, Tunisie |4 aut | ||
| 950 | |B NATIONALLICENCE |P 700 |E 1- |a Day |D G. |u Department of Chemistry, University of Southampton, SO17 1BJ, Southampton, UK |4 aut | ||
| 950 | |B NATIONALLICENCE |P 773 |E 0- |t Journal of Molecular Modeling |d Springer Berlin Heidelberg |g 21/8(2015-08-01), 1-14 |x 1610-2940 |q 21:8<1 |1 2015 |2 21 |o 894 | ||