caa a22 4500 606230025 CHVBK 20210128101212.0 cr unu---uuuuu 210128e20150601xx s 000 0 eng 10.1007/s10695-015-0046-9 doi (NATIONALLICENCE)springer-10.1007/s10695-015-0046-9 Proteomic profiling of white muscle from freshwater catfish Rita rita [Elektronische Daten] [Bimal Mohanty, Tandrima Mitra, Sudeshna Banerjee, Soma Bhattacharjee, Arabinda Mahanty, Satabdi Ganguly, Gopal Purohit, Dhanasekar Karunakaran, Sasmita Mohanty] Muscle tissues contribute 34-48% of the total body mass in fish. Proteomic analysis enables better understanding of the skeletal muscle physiology and metabolism. A proteome map reflects the general fingerprinting of the fish species and has the potential to identify novel proteins which could serve as biomarkers for many aspects of aquaculture including fish physiology and growth, flesh quality, food safety and aquatic environmental monitoring. The freshwater catfish Rita rita of the family Bagridae inhabiting the tropical rivers and estuaries is an important food fish with high nutritive value and is also considered a species of choice in riverine pollution monitoring. Omics information that could enhance utility of this species in molecular research is meager. Therefore, in the present study, proteomic analysis of Rita rita muscle has been carried out and functional genomics datahave been generated. A reference muscle proteome has been developed, and 23 protein spots, representing 18 proteins, have been identified by MALDI-TOF/TOF-MS and LC-MS/MS. Besides, transcript information on a battery of heat shock proteins (Hsps) has been generated. The functional genomics information generated could act as the baseline data for further molecular research on this species. Springer Science+Business Media Dordrecht, 2015 Muscle proteomics nationallicence Rita rita nationallicence Biomarkers nationallicence Flesh quality nationallicence Aquatic pollution biomonitoring nationallicence Mohanty Bimal Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Mitra Tandrima Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Banerjee Sudeshna Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Bhattacharjee Soma Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Mahanty Arabinda Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Ganguly Satabdi Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Purohit Gopal KIIT School of Biotechnology, KIIT University, 751 024, Bhubaneswar, Odisha, India aut Karunakaran Dhanasekar Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut Mohanty Sasmita KIIT School of Biotechnology, KIIT University, 751 024, Bhubaneswar, Odisha, India aut Fish Physiology and Biochemistry Springer Netherlands 41/3(2015-06-01), 789-802 0920-1742 41:3<789 2015 41 10695 https://doi.org/10.1007/s10695-015-0046-9 text/html Onlinezugriff via DOI BK010053 XK010053 XK010000 Metadata rights reserved Springer special CC-BY-NC licence nationallicence 1 research-article jats NATIONALLICENCE NATIONALLICENCE NL-springer NATIONALLICENCE 856 40 https://doi.org/10.1007/s10695-015-0046-9 text/html Onlinezugriff via DOI NATIONALLICENCE 700 1- Mohanty Bimal Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Mitra Tandrima Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Banerjee Sudeshna Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Bhattacharjee Soma Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Mahanty Arabinda Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Ganguly Satabdi Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Purohit Gopal KIIT School of Biotechnology, KIIT University, 751 024, Bhubaneswar, Odisha, India aut NATIONALLICENCE 700 1- Karunakaran Dhanasekar Proteomics Unit, Biochemistry Laboratory, Fishery Resource and Environmental Management Division, ICAR-Central Inland Fisheries Research Institute, 700 120, Barrackpore, Kolkata, India aut NATIONALLICENCE 700 1- Mohanty Sasmita KIIT School of Biotechnology, KIIT University, 751 024, Bhubaneswar, Odisha, India aut NATIONALLICENCE 773 0- Fish Physiology and Biochemistry Springer Netherlands 41/3(2015-06-01), 789-802 0920-1742 41:3<789 2015 41 10695